// Get retrieves a doc by its relative path (without .md extension).
func (ds *DocStore) Get(path string) (*models.Doc, error) {
    path = strings.TrimPrefix(path, "/")
    path = strings.TrimSuffix(path, ".md")

    // VULNERABLE: No containment check
    absPath := filepath.Join(ds.docsDir(), filepath.FromSlash(path)+".md")
    if _, err := os.Stat(absPath); err == nil {
        // ...
        return ds.parseFile(absPath, path, folder, false, "")
    }
    // ...
}

// Create writes a new doc to .knowns/docs/{path}.md.
func (ds *DocStore) Create(doc *models.Doc) error {
    if doc.Path == "" {
        return fmt.Errorf("doc path is required")
    }
    // VULNERABLE: No containment check
    absPath := filepath.Join(ds.docsDir(), filepath.FromSlash(doc.Path)+".md")
    if err := os.MkdirAll(filepath.Dir(absPath), 0755); err != nil {
        return fmt.Errorf("create doc dir: %w", err)
    }
    return ds.writeFile(absPath, doc)
}

// Rename rewrites a doc to a new path and removes the old file.
func (ds *DocStore) Rename(oldPath string, doc *models.Doc) error {
    // ...
    oldAbsPath := filepath.Join(ds.docsDir(), filepath.FromSlash(strings.TrimSuffix(oldPath, ".md"))+".md")
    newAbsPath := filepath.Join(ds.docsDir(), filepath.FromSlash(strings.TrimSuffix(doc.Path, ".md"))+".md")
    // ...
    if err := ds.writeFile(newAbsPath, doc); err != nil {
        return err
    }
    if oldAbsPath != newAbsPath {
        // VULNERABLE: Deletes file at oldAbsPath (can be outside docsDir)
        if err := os.Remove(oldAbsPath); err != nil && !os.IsNotExist(err) {
            return err
        }
    }
    return nil
}

// Delete removes a doc file.
func (ds *DocStore) Delete(path string) error {
    path = strings.TrimSuffix(path, ".md")
    // VULNERABLE: No containment check
    absPath := filepath.Join(ds.docsDir(), filepath.FromSlash(path)+".md")
    return os.Remove(absPath)
}

// GetInLayer retrieves a memory entry by ID from a specific layer only.
func (ms *MemoryStore) GetInLayer(id, layer string) (*models.MemoryEntry, error) {
    // ...
    dir, err := ms.dirForLayer(layer)
    if err != nil {
        return nil, err
    }
    // VULNERABLE: No containment check for id containing "../"
    absPath := filepath.Join(dir, models.MemoryFileName(id))
    if _, err := os.Stat(absPath); err != nil {
        return nil, fmt.Errorf("memory %q not found in %s layer", id, layer)
    }
    return ms.parseFile(absPath, layer)
}

// Create writes a new memory entry to the appropriate layer directory.
func (ms *MemoryStore) Create(entry *models.MemoryEntry) error {
    // ...
    dir, err := ms.dirForLayer(entry.Layer)
    if err != nil {
        return err
    }
    if err := os.MkdirAll(dir, 0755); err != nil {
        return fmt.Errorf("create memory dir: %w", err)
    }

    // VULNERABLE: No containment check for entry.ID containing "../"
    absPath := filepath.Join(dir, models.MemoryFileName(entry.ID))
    return atomicWrite(absPath, []byte(renderMemory(entry)))
}

// Delete removes a memory entry by ID.
func (ms *MemoryStore) Delete(id string) error {
    // ...
    filename := models.MemoryFileName(id)

    dirs := []string{ms.projectDir(), ms.globalDir()}
    for _, dir := range dirs {
        // VULNERABLE: No containment check
        absPath := filepath.Join(dir, filename)
        if _, err := os.Stat(absPath); err == nil {
            return os.Remove(absPath)
        }
    }

    return fmt.Errorf("memory %q not found", id)
}

func handleDocUpdate(getStore func() *storage.Store, req mcp.CallToolRequest) (*mcp.CallToolResult, error) {
    // ...
    if v, ok := stringArg(args, "newPath"); ok && strings.TrimSpace(v) != "" {
        doc.Path = strings.Trim(strings.TrimSuffix(v, ".md"), "/")
    }
    // ...
    if oldPath != doc.Path {
        if err := store.Docs.Rename(oldPath, doc); err != nil {
            return errFailed("rename doc", err)
        }
        // ...
    }
    // ...
}

if oldAbsPath != newAbsPath {
    if err := os.Remove(oldAbsPath); err != nil && !os.IsNotExist(err) {
        return err
    }
}

"docs.update":  {Capability: CapWrite, Target: TargetDoc, Risk: RiskMedium},

absPath := filepath.Join(baseDir, filepath.FromSlash(userInput))
// No containment check: strings.HasPrefix(absPath, baseDir)
// No rejection of ".." or absolute paths