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    63 repositories

    • eVCGsampler

      Public
      Energy distance based Virtual Control Group (VCG) sampling for baseline covariate balancing.
      HTML
      •
      Other
      •0•0•0•0•Updated Oct 15, 2026Oct 15, 2026

    • STA-TFM

      Public
      Official implementation of STA-TFM: Spatio-Temporal Aggregation Across Views TransForMer for Pose Estimation
      Python
      •
      Other
      •0•2•0•0•Updated Oct 9, 2026Oct 9, 2026

    • CD-spectra-deconvolution

      Public
      This repository is made to host a script that allows the deconvolution of nucleic acids CD spectra into a composition in percentage of elementary structure.
      Python
      •
      Other
      •0•0•1•0•Updated Oct 8, 2026Oct 8, 2026

    • CImpact

      Public
      Causal inference library for timeseries analysis
      machine-learningaitime-series
      machine-learningaitime-seriessolutionsimpactcausal-inferenceadvanced-analytics
      Python
      •
      Other
      •3•43•1•5•Updated Oct 6, 2026Oct 6, 2026

    • RiboNN

      Public
      RiboNN: predicting translation efficiencies from mRNA sequences
      deep-learningmrna-translation-efficiency
      deep-learningmrna-translation-efficiency
      Python
      •
      Other
      •19•69•1•0•Updated Sep 30, 2026Sep 30, 2026

    • ggcolonviz

      Public
      R
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      Other
      •1•0•0•1•Updated Sep 29, 2026Sep 29, 2026

    • BayesianSI.Calculator

      Public
      BSI_APP is an open-source R library project for Bayesian statistical interval and credibility interval/posterior predictive distribution generation and plotting…
      cc-0000023344
      cc-0000023344
      R
      •
      Apache License 2.0
      •2•1•1•0•Updated Sep 16, 2026Sep 16, 2026

    • CSM_dvds_bounds_survival_outcomes

      Public
      survival-analysissensitivity-analysiscausal-inference
      survival-analysissensitivity-analysiscausal-inference
      R
      •
      Other
      •0•1•0•0•Updated Sep 10, 2026Sep 10, 2026

    • MetTarget

      Public
      R
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      Other
      •0•0•0•0•Updated Aug 19, 2026Aug 19, 2026

    • GenAI_ICL

      Public
      Repository for LLM-guided molecular design via in-context learning.
      aiin-context-learning
      aiin-context-learning
      Jupyter Notebook
      •
      Other
      •0•0•0•0•Updated Aug 14, 2026Aug 14, 2026

    • MARL_drug_design

      Public
      Python
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      Other
      •0•0•0•0•Updated Aug 13, 2026Aug 13, 2026

    • whatsnew

      Public
      Package Comparing two versions of package and summarizes differences.
      HTML
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Aug 11, 2026Aug 11, 2026

    • EFTD-midog-amf

      Public
      Winning solution of MIDOG 2025 Task 2: parameter-efficient fine‑tuning of DINOv3‑H+ with domain‑weighted focal loss for robust atypical mitotic figure classific…
      pythoncomputer-visionpytorch
      pythoncomputer-visionpytorchimage-classificationmitosishistopathologydinov3midog2025
      Python
      •
      Other
      •1•7•0•0•Updated Aug 11, 2026Aug 11, 2026

    • GNN-Timeseries

      Public
      Jupyter Notebook
      •
      Other
      •0•0•1•0•Updated Jul 21, 2026Jul 21, 2026

    • PMX-CovEval

      Public
      AMPL
      •
      MIT License
      •0•2•1•0•Updated Jun 19, 2026Jun 19, 2026

    • SNAC-DB

      Public
      Repository containing pipelines developed for the SNAC-DB (Structural NANOBODY® VHH and Antibody Complex Database). SNAC-DB is ML-ready curation of the Protein …
      aiprotein-structureml
      aiprotein-structuremlantibodystructure-predictionnanobodynanobody-antigen-interactionantibody-antigen-interaction
      Python
      •
      Other
      •3•38•4•0•Updated Jun 8, 2026Jun 8, 2026

    • DDIapp

      Public
      Python
      •
      Other
      •1•0•1•0•Updated Jun 4, 2026Jun 4, 2026

    • CodonBERT

      Public
      Repository for mRNA Paper and CodonBERT publication.
      Python
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      Other
      •23•147•8•0•Updated May 19, 2026May 19, 2026

    • Alien

      Public
      Python
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      Other
      •3•17•0•0•Updated May 19, 2026May 19, 2026

    • geomaw-solv

      Public
      Jupyter Notebook
      •
      Other
      •0•0•0•0•Updated Apr 17, 2026Apr 17, 2026

    • MIPHEI-ViT

      Public
      MIPHEI-ViT: Repository to train Image-to-Image H&E to Immunofluorescence models
      pythonbenchmarkcomputer-vision
      pythonbenchmarkcomputer-visionpytorchproteomicsimage-to-image-translationhistopathologyvirtual-stainingfoundation-models
      Python
      •
      Other
      •12•61•4•0•Updated Apr 7, 2026Apr 7, 2026

    • Pref-BO

      Public
      Python
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      Other
      •0•2•1•0•Updated Mar 5, 2026Mar 5, 2026

    • Clinical-BERT-Training

      Public
      Python
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      Other
      •2•4•0•0•Updated Feb 27, 2026Feb 27, 2026

    • RetroDMTA

      Public
      Code for the paper "Back to the Future of Lead Optimization: Benchmarking Compound Prioritization Strategies"
      Python
      •
      Other
      •0•1•1•0•Updated Feb 24, 2026Feb 24, 2026

    • causal_survival_analysis

      Public
      Causal survival analysis
      HTML
      •
      GNU General Public License v3.0
      •1•4•0•0•Updated Feb 12, 2026Feb 12, 2026

    • enact-pipeline

      Public
      Repository for ENACT pipeline for end-to-end analysis of Visium HD data
      Python
      •
      Other
      •17•83•10•0•Updated Feb 10, 2026Feb 10, 2026

    • PKpredictionRat

      Public
      R
      •
      Other
      •0•1•0•0•Updated Jan 16, 2026Jan 16, 2026

    • prodigyprotein

      Public
      Protein Diversification and Generation through Yielded mutations (Prodigy) Protein is an end-to-end platform for plug and play protein engineering
      zero-shotprotein-engineeringprotein-language-models
      zero-shotprotein-engineeringprotein-language-models
      Python
      •
      Other
      •2•10•0•0•Updated Dec 30, 2025Dec 30, 2025

    • saemixPBPK

      Public
      The 'saemixPBPK' package allows the use of the SAEM algorithm to perform estimations with PBPK/QSP models developped with the OSP Suite
      R
      •
      GNU General Public License v2.0
      •0•3•0•0•Updated Dec 1, 2025Dec 1, 2025

    • EndotypeDetection-Timeseries

      Public
      Jupyter Notebook
      •
      Other
      •0•0•0•0•Updated Nov 20, 2025Nov 20, 2025
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